WormBase Tree Display for Variation: WBVar01401359
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WBVar01401359 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01401359 | ||||
Other_name | cewivar00735264 | |||||
H14E04.2a.1:c.893+339_893+341del | ||||||
H14E04.2c.1:c.914+339_914+341del | ||||||
H14E04.2b.1:c.902+339_902+341del | ||||||
H14E04.2d.1:c.527+339_527+341del | ||||||
HGVSg | CHROMOSOME_III:g.2381241_2381243del | |||||
Sequence_details | SMap | S_parent | Sequence | H14E04 | ||
Flanking_sequences | TACTGACGCGCTGAATTTGAATTTCTGTGTATGAATGAATAATCTTAAAA | TTTTTTTTTTTTGATTTAAAAAAAAACTTCTTTTTTTTAATCTTCAAAAT | ||||
Mapping_target | H14E04 | |||||
Type_of_mutation | Deletion | TTT | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
WGS_De_Bono | ||||||
WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00022902 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||
Laboratory | AX | |||||
Analysis | WGS_De_Bono | |||||
Million_mutation_project_reanalysis | ||||||
DB_info | Database | dbSNP_ss | ss | 539196246 | ||
Status | Live | |||||
Affects | Gene | WBGene00019199 | ||||
Transcript | H14E04.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | H14E04.2a.1:c.893+339_893+341del | |||||
Intron_number | 7/11 | |||||
H14E04.2c.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | H14E04.2c.1:c.914+339_914+341del | |||||
Intron_number | 8/12 | |||||
H14E04.2b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | H14E04.2b.1:c.902+339_902+341del | |||||
Intron_number | 7/11 | |||||
H14E04.2d.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | H14E04.2d.1:c.527+339_527+341del | |||||
Intron_number | 4/8 | |||||
Reference | WBPaper00037807 | |||||
Method | WGS_De_Bono |