WormBase Tree Display for Variation: WBVar01395391
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WBVar01395391 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01395391 | ||||
Other_name | cewivar00721772 | |||||
F19H8.1b.1:c.397-22del | ||||||
F19H8.1a.1:c.3343-22del | ||||||
HGVSg | CHROMOSOME_II:g.14609761del | |||||
Sequence_details | SMap | S_parent | Sequence | F19H8 | ||
Flanking_sequences | GAATTTGACATTAAGGTTTATATGAAGGTATGTTTTACAGATTGTAGGGG | AAATCCGAAAGTGTTTTCCAGACAGAAACAGATGGTCACGTATTCGATAA | ||||
Mapping_target | F19H8 | |||||
Type_of_mutation | Deletion | A | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (13) | ||||||
Laboratory | AX | |||||
Analysis | WGS_De_Bono | |||||
Million_mutation_project_reanalysis | ||||||
DB_info | Database | dbSNP_ss | ss | 539114647 | ||
Status | Live | |||||
Affects | Gene | WBGene00006603 | ||||
Transcript | F19H8.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | F19H8.1b.1:c.397-22del | |||||
Intron_number | 2/4 | |||||
F19H8.1a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F19H8.1a.1:c.3343-22del | |||||
Intron_number | 12/15 | |||||
Reference | WBPaper00037807 | |||||
Method | WGS_De_Bono |