WormBase Tree Display for Variation: WBVar01391831

WBVar01391831 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01391831
    Other_name: cewivar00737655
      Y54E10A.4c.1:c.370-30del
      Y54E10A.4a.2:c.535-30del
      Y54E10A.4b.1:c.1177-30del
      Y54E10A.4a.1:c.535-30del
    HGVSg: CHROMOSOME_I:g.3215283del
  Sequence_details: SMap: S_parent: Sequence: Y54E10A
    Flanking_sequences: TCTAAAGGTATAAAATTTGGCATTTTCGCAGCATTTTGAGTATAAAAGTT AAAAAAAACCAAAAAATTGCATATTTCAGATGATAGAGATCAAGCCATAC
    Mapping_target: Y54E10A
    Type_of_mutation: Deletion: A Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00006642 From_analysis: WGS_De_Bono
      WBStrain00006643 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006645 From_analysis: Million_mutation_project_reanalysis
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539111443
    Status: Live
  Affects: Gene: WBGene00001481
    Transcript: Y54E10A.4a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54E10A.4a.1:c.535-30del
        Intron_number: 8/10
      Y54E10A.4c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54E10A.4c.1:c.370-30del
        Intron_number: 2/3
      Y54E10A.4b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54E10A.4b.1:c.1177-30del
        Intron_number: 8/9
      Y54E10A.4a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54E10A.4a.2:c.535-30del
        Intron_number: 4/6
  Reference: WBPaper00037807
  Method: WGS_De_Bono