WormBase Tree Display for Variation: WBVar01340901
expand all nodes | collapse all nodes | view schema
| WBVar01340901 | Evidence | Paper_evidence | WBPaper00037807 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01340901 | ||||
| Other_name | cewivar00680798 | |||||
| F08A10.1f.2:c.593-1797_593-1796insC | ||||||
| F08A10.1f.1:c.593-1797_593-1796insC | ||||||
| F08A10.1k.1:c.680-1797_680-1796insC | ||||||
| F08A10.1a.1:c.494-1797_494-1796insC | ||||||
| F08A10.1h.1:c.494-1797_494-1796insC | ||||||
| F08A10.1d.1:c.473-1797_473-1796insC | ||||||
| F08A10.1j.1:c.1103-1797_1103-1796insC | ||||||
| F08A10.1i.1:c.494-1797_494-1796insC | ||||||
| F08A10.1e.1:c.596-1797_596-1796insC | ||||||
| HGVSg | CHROMOSOME_I:g.8204475_8204476insC | |||||
| Sequence_details | SMap | S_parent | Sequence | T02E1 | ||
| Flanking_sequences | CTCTTTCTGTTTTAGTTTTTGTGTTAGATTATTGCATTTTTTAGAAAAAA | GTTTTTATTCTAAATTCAAAAACTAGTATCTTCCAGACACCCATAGTCTT | ||||
| Mapping_target | T02E1 | |||||
| Type_of_mutation | Insertion | C | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | |||||
| Variation_type | SNP | |||||
| Natural_variant | ||||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | |||
| Million_mutation_project_reanalysis | ||||||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||
| Laboratory | AX | |||||
| Analysis | WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | ||||||
| DB_info | Database | dbSNP_ss | ss | 539016279 | ||
| History | Acquires_merge | WBVar01957329 | ||||
| Status | Live | |||||
| Affects | Gene | WBGene00008570 | ||||
| Transcript | F08A10.1h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | |||||
| HGVSc | F08A10.1h.1:c.494-1797_494-1796insC | |||||
| Intron_number | 5/13 | |||||
| F08A10.1k.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F08A10.1k.1:c.680-1797_680-1796insC | |||||
| Intron_number | 8/16 | |||||
| F08A10.1e.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F08A10.1e.1:c.596-1797_596-1796insC | |||||
| Intron_number | 6/14 | |||||
| F08A10.1f.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F08A10.1f.1:c.593-1797_593-1796insC | |||||
| Intron_number | 12/21 | |||||
| F08A10.1f.2 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F08A10.1f.2:c.593-1797_593-1796insC | |||||
| Intron_number | 9/18 | |||||
| F08A10.1j.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F08A10.1j.1:c.1103-1797_1103-1796insC | |||||
| Intron_number | 11/19 | |||||
| F08A10.1i.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F08A10.1i.1:c.494-1797_494-1796insC | |||||
| Intron_number | 5/13 | |||||
| F08A10.1d.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F08A10.1d.1:c.473-1797_473-1796insC | |||||
| Intron_number | 5/13 | |||||
| F08A10.1a.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F08A10.1a.1:c.494-1797_494-1796insC | |||||
| Intron_number | 6/15 | |||||
| Reference | WBPaper00037807 | |||||
| Method | WGS_De_Bono |
