WormBase Tree Display for Variation: WBVar01332904
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WBVar01332904 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01332904 | |||||
Other_name | cewivar00512839 | ||||||
D2045.9.2:c.*182A>G | |||||||
D2045.9.1:c.*182A>G | |||||||
D2045.9.3:c.*182A>G | |||||||
D2045.7.2:c.-28+80A>G | |||||||
HGVSg | CHROMOSOME_III:g.10479626A>G | ||||||
Sequence_details | SMap | S_parent | Sequence | D2045 | |||
Flanking_sequences | GCATTTGTACCGTGCGGGTCTCGCAACGAAAACTTTAACAAGTAGAAAAT | TTCGGTATTTTCACGAATTATTGATAATTATTCCATCGATTTTTAAAATG | |||||
Mapping_target | D2045 | ||||||
Type_of_mutation | Substitution | a | G | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
WGS_De_Bono | |||||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539187894 | |||
Status | Live | ||||||
Affects | Gene | WBGene00008424 | |||||
WBGene00008426 | |||||||
Transcript | D2045.7.2 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | D2045.7.2:c.-28+80A>G | ||||||
Intron_number | 1/8 | ||||||
D2045.9.1 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | D2045.9.1:c.*182A>G | ||||||
cDNA_position | 1830 | ||||||
Exon_number | 9/9 | ||||||
D2045.9.3 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | D2045.9.3:c.*182A>G | ||||||
cDNA_position | 2530 | ||||||
Exon_number | 8/8 | ||||||
D2045.9.2 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | D2045.9.2:c.*182A>G | ||||||
cDNA_position | 1805 | ||||||
Exon_number | 8/8 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |