WormBase Tree Display for Variation: WBVar01332821
expand all nodes | collapse all nodes | view schema
WBVar01332821 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01332821 | |||||
Other_name | cewivar00512828 | ||||||
H04D03.7.1:c.51C>T | |||||||
CE54201:p.Tyr17= | |||||||
HGVSg | CHROMOSOME_III:g.10446642G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | H04D03 | |||
Flanking_sequences | TACCCTGTCGCTCTGAGCAGAGAATCTATTTTGAAAAACTTCAATTTAAT | TAACGCTTCGAAAAATCGTCGGAAATTGGGGTAAGTAGAAAATGTGCCAT | |||||
Mapping_target | H04D03 | ||||||
Type_of_mutation | Substitution | g | A | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00006649 | From_analysis | WGS_Andersen | ||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||||
WGS_De_Bono | |||||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
WGS_Andersen | |||||||
DB_info | Database | dbSNP_ss | ss | 539187818 | |||
History | Acquires_merge | WBVar01448080 | |||||
Status | Live | ||||||
Affects | Gene | WBGene00305993 | |||||
Transcript | H04D03.7.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | ||||||
HGVSc | H04D03.7.1:c.51C>T | ||||||
HGVSp | CE54201:p.Tyr17= | ||||||
cDNA_position | 189 | ||||||
CDS_position | 51 | ||||||
Protein_position | 17 | ||||||
Exon_number | 2/4 | ||||||
Codon_change | taC/taT | ||||||
Amino_acid_change | Y | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |