WormBase Tree Display for Variation: WBVar01331700
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| WBVar01331700 | Evidence | Paper_evidence | WBPaper00037807 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01331700 | |||||
| Other_name | cewivar00512633 | ||||||
| F44E2.4.1:c.2523G>A | |||||||
| CE28232:p.Leu841= | |||||||
| HGVSg | CHROMOSOME_III:g.8834279C>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | F44E2 | |||
| Flanking_sequences | GGAGCAAGTGAATTGATATTCTTGATAAGTGACTGCATTCCTCCTGCGAA | AACTCTTCCACTCGAGACCCAATATCATTGAGTGGAGCTGCACAGTGTTC | |||||
| Mapping_target | F44E2 | ||||||
| Type_of_mutation | Substitution | c | T | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | SNP | ||||||
| Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain (15) | |||||||
| Laboratory | AX | ||||||
| Analysis | WGS_De_Bono | ||||||
| Million_mutation_project_reanalysis | |||||||
| WGS_Andersen | |||||||
| DB_info | Database | dbSNP_ss | ss | 539186809 | |||
| History | Acquires_merge | WBVar01447272 | |||||
| WBVar01447273 | |||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00018418 | |||||
| Transcript | F44E2.4.1 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | ||||||
| HGVSc | F44E2.4.1:c.2523G>A | ||||||
| HGVSp | CE28232:p.Leu841= | ||||||
| cDNA_position | 2572 | ||||||
| CDS_position | 2523 | ||||||
| Protein_position | 841 | ||||||
| Exon_number | 6/9 | ||||||
| Codon_change | ttG/ttA | ||||||
| Amino_acid_change | L | ||||||
| Reference | WBPaper00037807 | ||||||
| Method | WGS_De_Bono |
