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WormBase Tree Display for Variation: WBVar01329499

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Name Class

WBVar01329499EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar01329499
Other_namecewivar00486919
Y55D5A.5a.1:c.161+346T>C
Y55D5A.5d.1:c.20+346T>C
Y55D5A.5c.1:c.161+346T>C
HGVSgCHROMOSOME_III:g.3022732A>G
Sequence_detailsSMapS_parentSequenceY55D5A
Flanking_sequencesTGAAGAGAGAAAAAAAACGAAAGGAAAAAATGAGGGAAAAAAAAACGCTAAATTGAGTTAAAGCTCATTTCCGTGTCAATCTCAACACATAGCTGAAGCA
Mapping_targetY55D5A
Type_of_mutationSubstitutionaGPaper_evidenceWBPaper00037807
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022850From_analysisMillion_mutation_project_reanalysis
WGS_De_Bono
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
WBStrain00023192From_analysisMillion_mutation_project_reanalysis
LaboratoryAX
AnalysisWGS_De_Bono
Million_mutation_project_reanalysis
DB_infoDatabasedbSNP_ssss539184829
StatusLive
AffectsGeneWBGene00000898
TranscriptY55D5A.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5a.1:c.161+346T>C
Intron_number3/18
Y55D5A.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5c.1:c.161+346T>C
Intron_number4/20
Y55D5A.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5d.1:c.20+346T>C
Intron_number1/15
ReferenceWBPaper00037807
MethodWGS_De_Bono