WormBase Tree Display for Variation: WBVar01329482
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WBVar01329482 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01329482 | ||||
Other_name | cewivar00486913 | |||||
CE46852:p.Ala797= | ||||||
CE50158:p.Ala721= | ||||||
Y55D5A.5e.1:c.2163G>A | ||||||
Y55D5A.5d.1:c.2250G>A | ||||||
CE50312:p.Ala750= | ||||||
Y55D5A.5a.1:c.2391G>A | ||||||
CE50204:p.Ala797= | ||||||
Y55D5A.5c.1:c.2391G>A | ||||||
HGVSg | CHROMOSOME_III:g.3010508C>T | |||||
Sequence_details (5) | ||||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_De_Bono | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | ||||
Laboratory | AX | |||||
Analysis | WGS_De_Bono | |||||
Million_mutation_project_reanalysis | ||||||
DB_info | Database | dbSNP_ss | ss | 539184814 | ||
Status | Live | |||||
Affects | Gene | WBGene00000898 | ||||
Transcript | Y55D5A.5e.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | Y55D5A.5e.1:c.2163G>A | |||||
HGVSp | CE50158:p.Ala721= | |||||
cDNA_position | 2163 | |||||
CDS_position | 2163 | |||||
Protein_position | 721 | |||||
Exon_number | 8/15 | |||||
Codon_change | gcG/gcA | |||||
Amino_acid_change | A | |||||
Y55D5A.5a.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | |||||
HGVSc | Y55D5A.5a.1:c.2391G>A | |||||
HGVSp | CE46852:p.Ala797= | |||||
cDNA_position | 2489 | |||||
CDS_position | 2391 | |||||
Protein_position | 797 | |||||
Exon_number | 11/19 | |||||
Codon_change | gcG/gcA | |||||
Amino_acid_change | A | |||||
Y55D5A.5c.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | |||||
HGVSc | Y55D5A.5c.1:c.2391G>A | |||||
HGVSp | CE50204:p.Ala797= | |||||
cDNA_position | 2554 | |||||
CDS_position | 2391 | |||||
Protein_position | 797 | |||||
Exon_number | 12/21 | |||||
Codon_change | gcG/gcA | |||||
Amino_acid_change | A | |||||
Y55D5A.5d.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | |||||
HGVSc | Y55D5A.5d.1:c.2250G>A | |||||
HGVSp | CE50312:p.Ala750= | |||||
cDNA_position | 2250 | |||||
CDS_position | 2250 | |||||
Protein_position | 750 | |||||
Exon_number | 9/16 | |||||
Codon_change | gcG/gcA | |||||
Amino_acid_change | A | |||||
Reference | WBPaper00037807 | |||||
Method | WGS_De_Bono |