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WormBase Tree Display for Variation: WBVar01329439

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Name Class

WBVar01329439EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar01329439
Other_namecewivar00471518
Y55D5A.1b.4:c.411+213T>G
Y55D5A.1b.1:c.411+213T>G
Y55D5A.1a.1:c.780+213T>G
Y55D5A.1b.3:c.411+213T>G
Y55D5A.1b.2:c.411+213T>G
HGVSgCHROMOSOME_III:g.2987645T>G
Sequence_detailsSMapS_parentSequenceY55D5A
Flanking_sequencesTTTTTAACGAATTTTTGAAATTTTTTTTCGATTTTTTCAAAATTATTTACTTTTTACAAAAACTTTTTGTTAAAACTATAAAATTCATATTAAACGTTTT
Mapping_targetY55D5A
Type_of_mutationSubstitutiontGPaper_evidenceWBPaper00037807
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022850From_analysisMillion_mutation_project_reanalysis
WGS_De_Bono
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
WBStrain00023191From_analysisMillion_mutation_project_reanalysis
WBStrain00023192From_analysisMillion_mutation_project_reanalysis
LaboratoryAX
AnalysisWGS_De_Bono
Million_mutation_project_reanalysis
DB_infoDatabasedbSNP_ssss539184776
StatusLive
AffectsGeneWBGene00021915
TranscriptY55D5A.1b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.1b.3:c.411+213T>G
Intron_number4/5
Y55D5A.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.1b.1:c.411+213T>G
Intron_number6/7
Y55D5A.1b.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.1b.4:c.411+213T>G
Intron_number3/3
Y55D5A.1b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.1b.2:c.411+213T>G
Intron_number5/6
Y55D5A.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.1a.1:c.780+213T>G
Intron_number6/7
ReferenceWBPaper00037807
MethodWGS_De_Bono