WormBase Tree Display for Variation: WBVar01328062
expand all nodes | collapse all nodes | view schema
WBVar01328062 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01328062 | |||||
Other_name | cewivar00149091 | ||||||
Y54F10AM.10.1:c.2244T>C | |||||||
CE54056:p.Ala748= | |||||||
HGVSg | CHROMOSOME_III:g.2518995A>G | ||||||
Sequence_details | SMap | S_parent | Sequence | Y54F10AM | |||
Flanking_sequences | CATGTCAGCTTTCTCGAGAGCCCTGTCGCAGAGTCGGATGCTCCAGCGGC | GCAGCTGCATCCAACTTCTGAGCAGTAGTTTTTCCTTCAGGAGCTTCTGC | |||||
Mapping_target | Y54F10AM | ||||||
Type_of_mutation | Substitution | a | G | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain (32) | |||||||
Laboratory | AX | ||||||
QX | |||||||
Person | WBPerson1730 | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
WGS_Andersen | |||||||
DB_info | Database | dbSNP_ss | ss | 539183536 | |||
History | Acquires_merge | WBVar01444397 | |||||
Status | Live | ||||||
Affects | Gene | WBGene00004314 | |||||
Transcript | Y54F10AM.10.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | ||||||
HGVSc | Y54F10AM.10.1:c.2244T>C | ||||||
HGVSp | CE54056:p.Ala748= | ||||||
cDNA_position | 2305 | ||||||
CDS_position | 2244 | ||||||
Protein_position | 748 | ||||||
Exon_number | 13/20 | ||||||
Codon_change | gcT/gcC | ||||||
Amino_acid_change | A | ||||||
Reference | WBPaper00040707 | ||||||
WBPaper00037807 | |||||||
Method | WGS_De_Bono |