WormBase Tree Display for Variation: WBVar01327565

WBVar01327565 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01327565
    Other_name: cewivar00378197
      H14E04.2a.1:c.756-212C>T
      H14E04.2d.1:c.390-212C>T
      H14E04.2b.1:c.765-212C>T
      H14E04.2c.1:c.777-212C>T
    HGVSg: CHROMOSOME_III:g.2380553C>T
  Sequence_details: SMap: S_parent: Sequence: H14E04
    Flanking_sequences: AAAATTCTGGGTCCCGCCACGAAAACTACAGTACCCTTTCGTGGTGGGAC CAGAATTTTCAAAGTTAACGAAACATAGGCATAATGGGGATCATTTGAAA
    Mapping_target: H14E04
    Type_of_mutation: Substitution: c T Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00006640 From_analysis: Million_mutation_project_reanalysis
      WBStrain00008273 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022850 From_analysis: Million_mutation_project_reanalysis
          WGS_De_Bono
      WBStrain00022930 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023138 From_analysis: Million_mutation_project_reanalysis
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539183089
    Status: Live
  Affects: Gene: WBGene00019199
    Transcript: H14E04.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: H14E04.2a.1:c.756-212C>T
        Intron_number: 6/11
      H14E04.2c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: H14E04.2c.1:c.777-212C>T
        Intron_number: 7/12
      H14E04.2b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: H14E04.2b.1:c.765-212C>T
        Intron_number: 6/11
      H14E04.2d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: H14E04.2d.1:c.390-212C>T
        Intron_number: 3/8
  Reference: WBPaper00037807
  Method: WGS_De_Bono