WormBase Tree Display for Variation: WBVar01327557
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WBVar01327557 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01327557 | |||||
Other_name | cewivar00378192 | ||||||
H14E04.2d.1:c.119-232T>A | |||||||
H14E04.2b.1:c.494-232T>A | |||||||
H14E04.2a.1:c.485-232T>A | |||||||
H14E04.2c.1:c.506-232T>A | |||||||
HGVSg | CHROMOSOME_III:g.2379366T>A | ||||||
Sequence_details | SMap | S_parent | Sequence | H14E04 | |||
Flanking_sequences | CAGATTACTCGGGGGTACTGTAGCCCCAAAAGTACGCAAACACCGTCTCT | CGGTGTTTGCGCACTTGTCACGGTACAGTAACCCAAAAGCTTGAAAATAT | |||||
Mapping_target | H14E04 | ||||||
Type_of_mutation | Substitution | t | A | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | WGS_De_Bono | |||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539183082 | |||
Status | Live | ||||||
Affects | Gene | WBGene00019199 | |||||
Transcript | H14E04.2a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | H14E04.2a.1:c.485-232T>A | ||||||
Intron_number | 5/11 | ||||||
H14E04.2c.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | H14E04.2c.1:c.506-232T>A | ||||||
Intron_number | 6/12 | ||||||
H14E04.2b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | H14E04.2b.1:c.494-232T>A | ||||||
Intron_number | 5/11 | ||||||
H14E04.2d.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | H14E04.2d.1:c.119-232T>A | ||||||
Intron_number | 2/8 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |