WormBase Tree Display for Variation: WBVar01327555
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| WBVar01327555 | Evidence | Paper_evidence | WBPaper00037807 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01327555 | |||||
| Other_name | H14E04.2d.1:c.119-493G>T | ||||||
| H14E04.2c.1:c.506-493G>T | |||||||
| H14E04.2b.1:c.494-493G>T | |||||||
| H14E04.2a.1:c.485-493G>T | |||||||
| HGVSg | CHROMOSOME_III:g.2379105G>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | H14E04 | |||
| Flanking_sequences | CGGAGATGCGGAAGCTATGCCCAAATTTTCAATTTTTCCCCGGAAAACTT | TGATTTTCATCACTTTCTGGCAATTTTAGGAATTTTCCTGTACGAAATTC | |||||
| Mapping_target | H14E04 | ||||||
| Type_of_mutation | Substitution | g | T | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | SNP | ||||||
| Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00022850 | From_analysis | WGS_De_Bono | ||||
| Laboratory | AX | ||||||
| Analysis | WGS_De_Bono | ||||||
| DB_info | Database | dbSNP_ss | ss | 539183080 | |||
| Status | Live | ||||||
| Affects | Gene | WBGene00019199 | |||||
| Transcript | H14E04.2a.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | H14E04.2a.1:c.485-493G>T | ||||||
| Intron_number | 5/11 | ||||||
| H14E04.2c.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | H14E04.2c.1:c.506-493G>T | ||||||
| Intron_number | 6/12 | ||||||
| H14E04.2b.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | H14E04.2b.1:c.494-493G>T | ||||||
| Intron_number | 5/11 | ||||||
| H14E04.2d.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | H14E04.2d.1:c.119-493G>T | ||||||
| Intron_number | 2/8 | ||||||
| Reference | WBPaper00037807 | ||||||
| Method | WGS_De_Bono |
