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WormBase Tree Display for Variation: WBVar01326449

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Name Class

WBVar01326449EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar01326449
Other_namecewivar00022512
F53A3.4d.3:c.553-290T>C
F53A3.4d.1:c.553-290T>C
F53A3.4b.1:c.5419-290T>C
F53A3.4d.2:c.553-290T>C
F53A3.4a.1:c.5314-290T>C
HGVSgCHROMOSOME_III:g.1937391T>C
Sequence_detailsSMapS_parentSequenceF53A3
Flanking_sequencesCTTATCAAAAACTTATGAAACCCGTTGGATTAAGTTGAATTTTGCAAATTCCTACTTTTCTCTCAGTTTTCACTATTTTTCAATGTGATTTTCGAATTCC
Mapping_targetF53A3
Type_of_mutationSubstitutiontCPaper_evidenceWBPaper00037807
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (72)
LaboratoryAX
QX
PersonWBPerson1730
AnalysisWGS_De_Bono
Million_mutation_project_reanalysis
WGS_Andersen
DB_infoDatabasedbSNP_ssss539182085
HistoryAcquires_mergeWBVar01444050
StatusLive
AffectsGeneWBGene00004128
TranscriptF53A3.4d.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A3.4d.2:c.553-290T>C
Intron_number8/10
F53A3.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A3.4d.1:c.553-290T>C
Intron_number9/11
F53A3.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A3.4b.1:c.5419-290T>C
Intron_number21/23
F53A3.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A3.4a.1:c.5314-290T>C
Intron_number21/23
F53A3.4d.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A3.4d.3:c.553-290T>C
Intron_number8/10
ReferenceWBPaper00040707
WBPaper00037807
MethodWGS_De_Bono