WormBase Tree Display for Variation: WBVar01322388
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WBVar01322388 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01322388 | |||||
Other_name | cewivar00397290 | ||||||
F42G9.5b.2:c.139+14A>T | |||||||
F42G9.5a.1:c.691+14A>T | |||||||
F42G9.5b.1:c.139+14A>T | |||||||
HGVSg | CHROMOSOME_III:g.776847T>A | ||||||
Sequence_details | SMap | S_parent | Sequence | F42G9 | |||
Flanking_sequences | TTTCCTGAACAGAAGTTACAGTTGTATTCAGTTGAACTTGGAAAAAAAAT | AATTTTAACTTACCACTCCTGGGTTCAATCACTTCAAATTTGCGATCTGA | |||||
Mapping_target | F42G9 | ||||||
Type_of_mutation | Substitution | t | A | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain (12) | |||||||
Laboratory | AX | ||||||
QX | |||||||
Person | WBPerson1730 | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
WGS_Andersen | |||||||
DB_info | Database | dbSNP_ss | ss | 539178429 | |||
History | Acquires_merge | WBVar01443269 | |||||
Status | Live | ||||||
Affects | Gene | WBGene00000117 | |||||
Transcript | F42G9.5b.2 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | F42G9.5b.2:c.139+14A>T | ||||||
Intron_number | 3/7 | ||||||
F42G9.5a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | F42G9.5a.1:c.691+14A>T | ||||||
Intron_number | 3/8 | ||||||
F42G9.5b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | F42G9.5b.1:c.139+14A>T | ||||||
Intron_number | 2/7 | ||||||
Reference | WBPaper00040707 | ||||||
WBPaper00037807 | |||||||
Method | WGS_De_Bono |