WormBase Tree Display for Variation: WBVar01322386

WBVar01322386 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01322386
    Other_name: cewivar00397288
      F42G9.5a.1:c.691+169C>T
      F42G9.5b.1:c.139+169C>T
      F42G9.5b.2:c.139+169C>T
    HGVSg: CHROMOSOME_III:g.776692G>A
  Sequence_details: SMap: S_parent: Sequence: F42G9
    Flanking_sequences: CAAATCGGCAAATTGGCAAATTGATCGATTCGAAAATTTCCGGCAAATCC CAAATTGGCGGAATTGAAAATTTCCGGCAAATTGGTAATTTGCCGATTTG
    Mapping_target: F42G9
    Type_of_mutation: Substitution: g A Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00008273 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022850 From_analysis: Million_mutation_project_reanalysis
          WGS_De_Bono
      WBStrain00023138 From_analysis: Million_mutation_project_reanalysis
      WBStrain00031113 From_analysis: Million_mutation_project_reanalysis
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539178427
    Status: Live
  Affects: Gene: WBGene00000117
    Transcript: F42G9.5b.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F42G9.5b.2:c.139+169C>T
        Intron_number: 3/7
      F42G9.5a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F42G9.5a.1:c.691+169C>T
        Intron_number: 3/8
      F42G9.5b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F42G9.5b.1:c.139+169C>T
        Intron_number: 2/7
  Reference: WBPaper00037807
  Method: WGS_De_Bono