WormBase Tree Display for Variation: WBVar01321878
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WBVar01321878 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01321878 | |||||
Other_name | cewivar00189547 | ||||||
Y53F4B.22a.1:c.533+124G>A | |||||||
HGVSg | CHROMOSOME_II:g.15121040G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | Y53F4B | |||
Flanking_sequences | TTCAAAAAAATTTTCTAGATTTTATATGATTTTTTTTTTTTGAAAGTTGC | AAAATCCCAGTTTTCCCCTAATTCCGGTTTGAATTTCCGCCATATGAATT | |||||
Mapping_target | Y53F4B | ||||||
Type_of_mutation | Substitution | g | A | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||||
WGS_De_Bono | |||||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539177970 | |||
Status | Live | ||||||
Affects | Gene | WBGene00013168 | |||||
Transcript | Y53F4B.22a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | Y53F4B.22a.1:c.533+124G>A | ||||||
Intron_number | 3/6 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |