WormBase Tree Display for Variation: WBVar01320663
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WBVar01320663 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01320663 | |||||
Other_name | cewivar00511490 | ||||||
F19H8.4.1:c.738T>C | |||||||
CE32632:p.Ile246= | |||||||
HGVSg | CHROMOSOME_II:g.14617642T>C | ||||||
Sequence_details | SMap | S_parent | Sequence | F19H8 | |||
Flanking_sequences | TATTGCAGTGGAAACAATTTGAGATCATCTTCCAATAAAGAAAATCTTAT | CTGGAATTCAAGAGGAAATGGAGGAATCAGAGAAATTTGAGAAACAGGAA | |||||
Mapping_target | F19H8 | ||||||
Type_of_mutation | Substitution | t | C | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00006698 | From_analysis | WGS_Andersen | ||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||||
WGS_De_Bono | |||||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
WGS_Andersen | |||||||
DB_info | Database | dbSNP_ss | ss | 539176876 | |||
History | Acquires_merge | WBVar01442482 | |||||
Status | Live | ||||||
Affects | Gene | WBGene00008964 | |||||
Transcript | F19H8.4.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | ||||||
HGVSc | F19H8.4.1:c.738T>C | ||||||
HGVSp | CE32632:p.Ile246= | ||||||
cDNA_position | 839 | ||||||
CDS_position | 738 | ||||||
Protein_position | 246 | ||||||
Exon_number | 5/12 | ||||||
Codon_change | atT/atC | ||||||
Amino_acid_change | I | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |