WormBase Tree Display for Variation: WBVar01311399
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WBVar01311399 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01311399 | |||||
Other_name | cewivar00485656 | ||||||
F40F8.3.1:c.73+6T>C | |||||||
HGVSg | CHROMOSOME_II:g.11129367T>C | ||||||
Sequence_details | SMap | S_parent | Sequence | F40F8 | |||
Flanking_sequences | AATATTTTTCGTTGAAATTAAAGAATTTCTTTAAAGTAAGAAAAGGTGTG | GACTACTGTAGTTTTAGATTGTTGCTGCGGAATTTTCACAGATTTTTCAT | |||||
Mapping_target | F40F8 | ||||||
Type_of_mutation | Substitution | t | C | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
WGS_De_Bono | |||||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539168539 | |||
Status | Live | ||||||
Affects | Gene | WBGene00009576 | |||||
Transcript | F40F8.3.1 | VEP_consequence | splice_region_variant,intron_variant | ||||
VEP_impact | LOW | ||||||
HGVSc | F40F8.3.1:c.73+6T>C | ||||||
Intron_number | 1/4 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |