WormBase Tree Display for Variation: WBVar01306159

WBVar01306159 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01306159
    Other_name: cewivar00355298
      F59E12.16c.1:n.1559A>G
      CE33408:p.Asp324Gly
      F59E12.6a.2:c.1112A>G
      CE33407:p.Asp371Gly
      F59E12.6a.1:c.1112A>G
      F59E12.6b.1:c.971A>G
      F59E12.15.1:c.-369A>G
    HGVSg: CHROMOSOME_II:g.5627632T>C
  Sequence_details: SMap: S_parent: Sequence: F59E12
    Flanking_sequences: ACGCTGAAGCCGTCTTACTGGATCCTGTTCCAAATGATTGAGCCGCAACA CCTCCCATCGAACATTGGATACCCTATCATCATCAAATTTTGACCACCGA
    Mapping_target: F59E12
    Type_of_mutation: Substitution: t C Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00006637 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022850 From_analysis: Million_mutation_project_reanalysis
          WGS_De_Bono
      WBStrain00023191 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023286 From_analysis: Million_mutation_project_reanalysis
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539163823
    Status: Live
  Affects: Gene: WBGene00305468
      WBGene00019122
      WBGene00235270
      WBGene00235269
    Transcript: F59E12.6a.2 (12)
      F59E12.18
      F59E12.6b.1 (12)
      F59E12.15.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F59E12.15.1:c.-369A>G
        cDNA_position: 745
        Exon_number: 1/5
      F59E12.6a.1 (12)
    Pseudogene: F59E12.16c VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        HGVSc: F59E12.16c.1:n.1559A>G
        cDNA_position: 1559
        Exon_number: 6/8
  Reference: WBPaper00037807
  Method: WGS_De_Bono