WormBase Tree Display for Variation: WBVar01292039

WBVar01292039 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01292039
    Other_name: cewivar00303053
      T27A1.3b.1:c.416+106C>T
      T27A1.3a.1:c.416+106C>T
      T27A1.2a.1:c.-177G>A
    HGVSg: CHROMOSOME_II:g.536243C>T
  Sequence_details: SMap: S_parent: Sequence: T27A1
    Flanking_sequences: CACAGCTTACGCAATACACAACAAAAACACTTACAATTTGATAAAGTCCC GTCGATGCACCATAATCGAGTTATGAGTTGGTTGGGGTTCAGGGGTGTGC
    Mapping_target: T27A1
    Type_of_mutation: Substitution: c T Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (24)
    Laboratory: AX
      QX
    Person: WBPerson1730
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
      WGS_Andersen
    DB_info: Database: dbSNP_ss ss 539151115
    History: Acquires_merge: WBVar01435432
    Status: Live
  Affects: Gene: WBGene00020835
      WBGene00020834
    Transcript: T27A1.3a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T27A1.3a.1:c.416+106C>T
        Intron_number: 4/5
      T27A1.2a.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: T27A1.2a.1:c.-177G>A
        cDNA_position: 633
        Exon_number: 1/7
      T27A1.3b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T27A1.3b.1:c.416+106C>T
        Intron_number: 3/5
  Reference: WBPaper00040707
    WBPaper00037807
  Method: WGS_De_Bono