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WormBase Tree Display for Variation: WBVar01291192

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Name Class

WBVar01291192EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar01291192
Other_namecewivar00506323
Y43H11AL.1a.3:c.370+280T>C
Y43H11AL.1b.1:c.370+280T>C
Y43H11AL.1a.4:c.370+280T>C
Y43H11AL.1a.1:c.370+280T>C
Y43H11AL.1c.1:c.328+280T>C
Y43H11AL.1a.2:c.370+280T>C
HGVSgCHROMOSOME_II:g.231420A>G
Sequence_detailsSMapS_parentSequenceY43H11AL
Flanking_sequencesAATTTTCTCCACTTCTCGGTGTCGTAACGTCTGAAACCTAATCTTTATTTTTTATCACTTTTTAATAAATATTGTGGCCTTTGATTGTGCGTTTATTCGT
Mapping_targetY43H11AL
Type_of_mutationSubstitutionaGPaper_evidenceWBPaper00037807
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022850From_analysisMillion_mutation_project_reanalysis
WGS_De_Bono
WBStrain00023018From_analysisMillion_mutation_project_reanalysis
LaboratoryAX
AnalysisWGS_De_Bono
Million_mutation_project_reanalysis
DB_infoDatabasedbSNP_ssss539150353
StatusLive
AffectsGeneWBGene00021545
TranscriptY43H11AL.1a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY43H11AL.1a.3:c.370+280T>C
Intron_number3/10
Y43H11AL.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY43H11AL.1c.1:c.328+280T>C
Intron_number1/8
Y43H11AL.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY43H11AL.1b.1:c.370+280T>C
Intron_number3/11
Y43H11AL.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY43H11AL.1a.1:c.370+280T>C
Intron_number3/10
Y43H11AL.1a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY43H11AL.1a.2:c.370+280T>C
Intron_number3/8
Y43H11AL.1a.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY43H11AL.1a.4:c.370+280T>C
Intron_number3/9
ReferenceWBPaper00037807
MethodWGS_De_Bono