WormBase Tree Display for Variation: WBVar01289803
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WBVar01289803 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01289803 | |||||
Other_name | cewivar00326039 | ||||||
F49B2.6.1:c.181G>T | |||||||
CE40456:p.Ala61Ser | |||||||
HGVSg | CHROMOSOME_I:g.14331802G>T | ||||||
Sequence_details | SMap | S_parent | Sequence | F49B2 | |||
Flanking_sequences | TTGGACTTCTGATGTTCGGACTAGGTGTCTCAGTTGGAGCATTCCTTCAC | CAGTCATGTTTCCTGATGGATCCCCGTCCATTCTTAGCCTCCCGTCTTTC | |||||
Mapping_target | F49B2 | ||||||
Type_of_mutation | Substitution | g | T | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00006642 | From_analysis | WGS_De_Bono | |||||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539149103 | |||
History | Acquires_merge | WBVar01428552 | |||||
Status | Live | ||||||
Affects | Gene | WBGene00009865 | |||||
Transcript | F49B2.6.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | ||||||
HGVSc | F49B2.6.1:c.181G>T | ||||||
HGVSp | CE40456:p.Ala61Ser | ||||||
cDNA_position | 181 | ||||||
CDS_position | 181 | ||||||
Protein_position | 61 | ||||||
Exon_number | 2/19 | ||||||
Codon_change | Gca/Tca | ||||||
Amino_acid_change | A/S | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |