WormBase Tree Display for Variation: WBVar01285890
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WBVar01285890 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01285890 | |||||
Other_name | cewivar00324336 | ||||||
R06C1.1.1:c.836-166G>A | |||||||
HGVSg | CHROMOSOME_I:g.11913964C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | R06C1 | |||
Flanking_sequences | ATTTTTCAGATGTTTTTCGTTAAAAATACGTTTTAAAAAATTGTTTTTGT | ATAGAAAACTCATTATCTGTTTTTTTTTTTGTGAAAAAGGCAATTTTTAG | |||||
Mapping_target | R06C1 | ||||||
Type_of_mutation | Substitution | c | T | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00006642 | From_analysis | WGS_De_Bono | |||||
WBStrain00022850 | From_analysis | WGS_De_Bono | |||||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539145582 | |||
History | Acquires_merge | WBVar01424807 | |||||
Status | Live | ||||||
Affects | Gene | WBGene00001836 | |||||
Transcript | R06C1.1.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | R06C1.1.1:c.836-166G>A | ||||||
Intron_number | 3/5 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |