WormBase Tree Display for Variation: WBVar01281936
expand all nodes | collapse all nodes | view schema
WBVar01281936 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01281936 | |||||
Other_name | cewivar00505571 | ||||||
T21E12.4a.1:c.672+6A>G | |||||||
HGVSg | CHROMOSOME_I:g.4387467A>G | ||||||
Sequence_details | SMap | S_parent | Sequence | T21E12 | |||
Flanking_sequences | TTGGATGCTATCGAGCAGGCTGGAAAGGAAAACCGTCGTGCTAAGGTAGG | CTTATTTTATGTACTATTAAAGCTATAGAAGTTACTAACAGATCGAAGAT | |||||
Mapping_target | T21E12 | ||||||
Type_of_mutation | Substitution | a | G | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
WGS_De_Bono | |||||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539142022 | |||
Status | Live | ||||||
Affects | Gene | WBGene00000962 | |||||
Transcript | T21E12.4a.1 | VEP_consequence | splice_region_variant,intron_variant | ||||
VEP_impact | LOW | ||||||
HGVSc | T21E12.4a.1:c.672+6A>G | ||||||
Intron_number | 2/16 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |