WormBase Tree Display for Variation: WBVar01281753

WBVar01281753 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01281753
    Other_name: cewivar00505462
      C43E11.2b.3:c.-386A>C
      C43E11.2b.2:c.-953A>C
      C43E11.2b.1:c.-953A>C
      CE08680:p.Asp134Ala
      C43E11.2a.1:c.401A>C
    HGVSg: CHROMOSOME_I:g.4265615A>C
  Sequence_details: SMap: S_parent: Sequence: C43E11
    Flanking_sequences: GAAGGATGCGAAAAGATTGGAAAAACAGAAATCAACGAAAACCATTGTTG TATAGAAAATGAATTCGAATCGGATGGAGATGATGACAAGCAACCAAGTG
    Mapping_target: C43E11
    Type_of_mutation: Substitution: a C Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00022850 From_analysis: WGS_De_Bono
          Million_mutation_project_reanalysis
          WGS_Andersen
    Laboratory: AX
      QX
    Person: WBPerson1730
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
      WGS_Andersen
    DB_info: Database: dbSNP_ss ss 539141857
    History: Acquires_merge: WBVar01431337
    Status: Live
  Affects: Gene: WBGene00016602
    Transcript: C43E11.2b.2 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C43E11.2b.2:c.-953A>C
        cDNA_position: 213
        Exon_number: 1/4
      C43E11.2b.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C43E11.2b.1:c.-953A>C
        cDNA_position: 403
        Exon_number: 3/6
      C43E11.2a.1 (12)
      C43E11.2b.3 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C43E11.2b.3:c.-386A>C
        cDNA_position: 210
        Exon_number: 1/5
  Reference: WBPaper00040707
    WBPaper00037807
  Method: WGS_De_Bono