WormBase Tree Display for Variation: WBVar01281327
expand all nodes | collapse all nodes | view schema
| WBVar01281327 | Evidence | Paper_evidence | WBPaper00037807 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01281327 | |||||
| Other_name | cewivar00505212 | ||||||
| F55C7.7i.1:c.636A>G | |||||||
| F55C7.7a.1:c.636A>G | |||||||
| F55C7.7i.2:c.636A>G | |||||||
| CE19464:p.Ala212= | |||||||
| CE36937:p.Ala212= | |||||||
| CE19465:p.Ala212= | |||||||
| F55C7.7b.1:c.636A>G | |||||||
| HGVSg | CHROMOSOME_I:g.4028053T>C | ||||||
| Sequence_details | SMap | S_parent | Sequence | C09D1 | |||
| Flanking_sequences | TTCCCTTCTGTCTCAATTCCTTCCACCGGAACATTAAATATACTATTCTT | GCGTGTTGGCTCTTTTTCAGCGCAGCGTTGGCAGTTGTCACATCGACAGG | |||||
| Mapping_target | C09D1 | ||||||
| Type_of_mutation | Substitution | t | C | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | SNP | ||||||
| Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
| WGS_De_Bono | |||||||
| Laboratory | AX | ||||||
| Analysis | WGS_De_Bono | ||||||
| Million_mutation_project_reanalysis | |||||||
| DB_info | Database | dbSNP_ss | ss | 539141475 | |||
| Status | Live | ||||||
| Affects | Gene | WBGene00006805 | |||||
| Transcript | F55C7.7i.1 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | ||||||
| HGVSc | F55C7.7i.1:c.636A>G | ||||||
| HGVSp | CE36937:p.Ala212= | ||||||
| cDNA_position | 636 | ||||||
| CDS_position | 636 | ||||||
| Protein_position | 212 | ||||||
| Exon_number | 4/26 | ||||||
| Codon_change | gcA/gcG | ||||||
| Amino_acid_change | A | ||||||
| F55C7.7b.1 | VEP_consequence | synonymous_variant | |||||
| VEP_impact | LOW | ||||||
| HGVSc | F55C7.7b.1:c.636A>G | ||||||
| HGVSp | CE19465:p.Ala212= | ||||||
| cDNA_position | 636 | ||||||
| CDS_position | 636 | ||||||
| Protein_position | 212 | ||||||
| Exon_number | 4/21 | ||||||
| Codon_change | gcA/gcG | ||||||
| Amino_acid_change | A | ||||||
| F55C7.7a.1 | VEP_consequence | synonymous_variant | |||||
| VEP_impact | LOW | ||||||
| HGVSc | F55C7.7a.1:c.636A>G | ||||||
| HGVSp | CE19464:p.Ala212= | ||||||
| cDNA_position | 748 | ||||||
| CDS_position | 636 | ||||||
| Protein_position | 212 | ||||||
| Exon_number | 5/34 | ||||||
| Codon_change | gcA/gcG | ||||||
| Amino_acid_change | A | ||||||
| F55C7.7i.2 | VEP_consequence | synonymous_variant | |||||
| VEP_impact | LOW | ||||||
| HGVSc | F55C7.7i.2:c.636A>G | ||||||
| HGVSp | CE36937:p.Ala212= | ||||||
| cDNA_position | 636 | ||||||
| CDS_position | 636 | ||||||
| Protein_position | 212 | ||||||
| Exon_number | 4/25 | ||||||
| Codon_change | gcA/gcG | ||||||
| Amino_acid_change | A | ||||||
| Reference | WBPaper00037807 | ||||||
| Method | WGS_De_Bono |
