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WormBase Tree Display for Variation: WBVar01280845

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Name Class

WBVar01280845EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar01280845
Other_namecewivar00504838
F21A9.1a.2:c.-486-36T>A
F21A9.1a.1:c.-522T>A
F21A9.1b.1:c.52-36T>A
HGVSgCHROMOSOME_I:g.3711216T>A
Sequence_detailsSMapS_parentSequenceF21A9
Flanking_sequencesCCAAGAGCATTTTTTATTCCTCATAATCAGAAAGACACTTTGAATTTTTTAAAAATGAACTCCAAAAAATATAGAAACCTTCCAGGAATCAGCACTAGAA
Mapping_targetF21A9
Type_of_mutationSubstitutiontAPaper_evidenceWBPaper00037807
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022850From_analysisMillion_mutation_project_reanalysis
WGS_De_Bono
LaboratoryAX
AnalysisWGS_De_Bono
Million_mutation_project_reanalysis
DB_infoDatabasedbSNP_ssss539141040
StatusLive
AffectsGeneWBGene00017650
TranscriptF21A9.1a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF21A9.1a.2:c.-486-36T>A
Intron_number1/7
F21A9.1a.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScF21A9.1a.1:c.-522T>A
cDNA_position1127
Exon_number1/7
F21A9.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF21A9.1b.1:c.52-36T>A
Intron_number1/5
ReferenceWBPaper00037807
MethodWGS_De_Bono