WormBase Tree Display for Variation: WBVar01277078
expand all nodes | collapse all nodes | view schema
WBVar01277078 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01277078 | |||||
Other_name | cewivar00383734 | ||||||
Y48G8AL.8.1:c.419-20T>A | |||||||
HGVSg | CHROMOSOME_I:g.1157254T>A | ||||||
Sequence_details | SMap | S_parent | Sequence | Y48G8AL | |||
Flanking_sequences | AATATTGTGCATATTTGAAAACTTCAAAATTTTTTAAAAAGTTTTCTCGC | TTAAATAAATTAATTTCAGCATACATGTCTTCCCCATGCCACATCGAGGT | |||||
Mapping_target | Y48G8AL | ||||||
Type_of_mutation | Substitution | t | A | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00006642 | From_analysis | WGS_De_Bono | ||||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539137650 | |||
History | Acquires_merge | WBVar01417649 | |||||
Status | Live | ||||||
Affects | Gene | WBGene00004429 | |||||
Transcript | Y48G8AL.8.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | Y48G8AL.8.1:c.419-20T>A | ||||||
Intron_number | 3/4 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |