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WormBase Tree Display for Variation: WBVar01274816

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Name Class

WBVar01274816EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar01274816
Other_namecewivar00388577
CE40083:p.Ser19=
H23N18.5.1:c.57A>T
HGVSgCHROMOSOME_V:g.4912324T>A
Sequence_detailsSMapS_parentSequenceH23N18
Flanking_sequencesAGCTCCGCAAATCCAGACTGAATTGGATCGTGTCCGCATGAAAAACGAGCGACACCATAGTTATAGCACATAGGGAGACAAGAATTGCCAAAAGTGAGCT
Mapping_targetH23N18
Type_of_mutationSubstitutiontAPaper_evidenceWBPaper00037807
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00006642From_analysisWGS_De_Bono
WBStrain00006643From_analysisMillion_mutation_project_reanalysis
WBStrain00006645From_analysisMillion_mutation_project_reanalysis
LaboratoryAX
AnalysisWGS_De_Bono
Million_mutation_project_reanalysis
DB_infoDatabasedbSNP_ssss539109279
StatusLive
AffectsGeneWBGene00019236
TranscriptH23N18.5.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScH23N18.5.1:c.57A>T
HGVSpCE40083:p.Ser19=
cDNA_position58
CDS_position57
Protein_position19
Exon_number2/5
Codon_changetcA/tcT
Amino_acid_changeS
ReferenceWBPaper00037807
MethodWGS_De_Bono