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WormBase Tree Display for Variation: WBVar01270904

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Name Class

WBVar01270904EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar01270904
Other_namecewivar00110406
Y56A3A.2.1:c.1754+105C>A
HGVSgCHROMOSOME_III:g.11851406G>T
Sequence_detailsSMapS_parentSequenceY56A3A
Flanking_sequencesGCCAACAGATTTTTTCTCTCAGTTTTTGAACAAAAAACTCAACTAAAAATTTGGAATTTTCGTTTTCGCGGATCCAAATTCCGCGAATTAAGCTCCGCCC
Mapping_targetY56A3A
Type_of_mutationSubstitutiongTPaper_evidenceWBPaper00037807
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (20)
LaboratoryAX
AnalysisWGS_De_Bono
Million_mutation_project_reanalysis
DB_infoDatabasedbSNP_ssss539105758
StatusLive
AffectsGeneWBGene00013225
TranscriptY56A3A.2.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY56A3A.2.1:c.1754+105C>A
Intron_number8/9
ReferenceWBPaper00037807
MethodWGS_De_Bono