WormBase Tree Display for Variation: WBVar01270439
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WBVar01270439 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01270439 | ||||
Other_name | cewivar00687019 | |||||
F54C4.2.1:c.*123del | ||||||
HGVSg | CHROMOSOME_III:g.69103del | |||||
Sequence_details | SMap | S_parent | Sequence | F54C4 | ||
Flanking_sequences | CCAAGGAAAAGGAAAAAACTCCCGTAAGTGTGATTTATTGGAAGATCGAG | AAAAAATGATTCAAAAATGGATATAAAAAGTTAAAAAAAAACACAGAAAA | ||||
Mapping_target | F54C4 | |||||
Type_of_mutation | Deletion | A | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_De_Bono | ||||||
Laboratory | AX | |||||
Analysis | WGS_De_Bono | |||||
Million_mutation_project_reanalysis | ||||||
DB_info | Database | dbSNP_ss | ss | 539008680 | ||
Status | Live | |||||
Affects | Gene | WBGene00005014 | ||||
Transcript | F54C4.2.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | F54C4.2.1:c.*123del | |||||
cDNA_position | 500 | |||||
Exon_number | 4/4 | |||||
Reference | WBPaper00037807 | |||||
Method | WGS_De_Bono |