WormBase Tree Display for Variation: WBVar01269786

WBVar01269786 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01269786
    Other_name: cewivar00025281
      CE48290:p.Cys507=
      Y47D3B.1.1:c.1521T>C
    HGVSg: CHROMOSOME_III:g.11388520T>C
  Sequence_details: SMap: S_parent: Sequence: Y47D3B
    Flanking_sequences: CCAAAAGTTCCATTTATTCCAGTCCGCATCCAGAAAGCAGAGGTAAACTG GAATCACCTGTGCCGCCATTCACTTCTGGAAATCATTACTTTGCTCCATA
    Mapping_target: Y47D3B
    Type_of_mutation: Substitution: t C Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (11)
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539104751
    History: Acquires_merge: WBVar01334864
    Status: Live
  Affects: Gene: WBGene00012939
    Transcript: Y47D3B.1.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y47D3B.1.1:c.1521T>C
        HGVSp: CE48290:p.Cys507=
        cDNA_position: 1580
        CDS_position: 1521
        Protein_position: 507
        Exon_number: 12/13
        Codon_change: tgT/tgC
        Amino_acid_change: C
  Reference: WBPaper00037807
  Method: WGS_De_Bono