WormBase Tree Display for Variation: WBVar01259431
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WBVar01259431 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01259431 | |||||
Other_name | cewivar00285259 | ||||||
H14E04.2d.1:c.1132-185G>T | |||||||
H14E04.2c.1:c.1519-185G>T | |||||||
H14E04.2a.1:c.1498-185G>T | |||||||
H14E04.2b.1:c.1507-185G>T | |||||||
HGVSg | CHROMOSOME_III:g.2383653G>T | ||||||
Sequence_details | SMap | S_parent | Sequence | H14E04 | |||
Flanking_sequences | AATTTGAATTTCGAGCTAAGACGTGTTACAGTTTTAAAAATGCACGGGAA | CTCGATTTTTATAATGAAAAATGCTGAAAATTCCTAAAAATTCGAAAAAA | |||||
Mapping_target | H14E04 | ||||||
Type_of_mutation | Substitution | g | T | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00006642 | From_analysis | WGS_De_Bono | |||||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539095432 | |||
Status | Live | ||||||
Affects | Gene | WBGene00019199 | |||||
Transcript | H14E04.2a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | H14E04.2a.1:c.1498-185G>T | ||||||
Intron_number | 9/11 | ||||||
H14E04.2c.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | H14E04.2c.1:c.1519-185G>T | ||||||
Intron_number | 10/12 | ||||||
H14E04.2b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | H14E04.2b.1:c.1507-185G>T | ||||||
Intron_number | 9/11 | ||||||
H14E04.2d.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | H14E04.2d.1:c.1132-185G>T | ||||||
Intron_number | 6/8 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |