WormBase Tree Display for Variation: WBVar01259427
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| WBVar01259427 | Evidence | Paper_evidence | WBPaper00037807 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01259427 | |||||
| Other_name | cewivar00285258 | ||||||
| H14E04.2b.1:c.1507-305T>G | |||||||
| H14E04.2d.1:c.1132-305T>G | |||||||
| H14E04.2a.1:c.1498-305T>G | |||||||
| H14E04.2c.1:c.1519-305T>G | |||||||
| HGVSg | CHROMOSOME_III:g.2383533T>G | ||||||
| Sequence_details | SMap | S_parent | Sequence | H14E04 | |||
| Flanking_sequences | TCAATACAAAATTCGACTTCTCCATCACTTTTCACCCCCGGAACCTGGTT | TCAGCCAATTTGGACTAACTGTCGTAAAATTCGGTGTTTGCGTACTTTTG | |||||
| Mapping_target | H14E04 | ||||||
| Type_of_mutation | Substitution | t | G | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | SNP | ||||||
| Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00006642 | From_analysis | WGS_De_Bono | |||||
| WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||||
| Laboratory | AX | ||||||
| Analysis | WGS_De_Bono | ||||||
| Million_mutation_project_reanalysis | |||||||
| DB_info | Database | dbSNP_ss | ss | 539095429 | |||
| Status | Live | ||||||
| Affects | Gene | WBGene00019199 | |||||
| Transcript | H14E04.2a.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | H14E04.2a.1:c.1498-305T>G | ||||||
| Intron_number | 9/11 | ||||||
| H14E04.2c.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | H14E04.2c.1:c.1519-305T>G | ||||||
| Intron_number | 10/12 | ||||||
| H14E04.2b.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | H14E04.2b.1:c.1507-305T>G | ||||||
| Intron_number | 9/11 | ||||||
| H14E04.2d.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | H14E04.2d.1:c.1132-305T>G | ||||||
| Intron_number | 6/8 | ||||||
| Reference | WBPaper00037807 | ||||||
| Method | WGS_De_Bono |
