WormBase Tree Display for Variation: WBVar01259425

WBVar01259425 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01259425
    Other_name: cewivar00124286
      H14E04.2d.1:c.803-226T>A
      H14E04.2a.1:c.1169-226T>A
      H14E04.2b.1:c.1178-226T>A
      H14E04.2c.1:c.1190-226T>A
    HGVSg: CHROMOSOME_III:g.2382253T>A
  Sequence_details: SMap: S_parent: Sequence: H14E04
    Flanking_sequences: TTTAAATTTGCATTATTAAAATTCGTATTCATCTCATCGAGACCTTCAAA TGACCCCCAACACGCCCAGTTTCCGTTAATTTTGAAAAAAGTTGGGTCCC
    Mapping_target: H14E04
    Type_of_mutation: Substitution: t A Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (23)
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539095427
    History: Acquires_merge: WBVar01327573
    Status: Live
  Affects: Gene: WBGene00019199
    Transcript: H14E04.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: H14E04.2a.1:c.1169-226T>A
        Intron_number: 8/11
      H14E04.2c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: H14E04.2c.1:c.1190-226T>A
        Intron_number: 9/12
      H14E04.2b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: H14E04.2b.1:c.1178-226T>A
        Intron_number: 8/11
      H14E04.2d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: H14E04.2d.1:c.803-226T>A
        Intron_number: 5/8
  Reference: WBPaper00037807
  Method: WGS_De_Bono