WormBase Tree Display for Variation: WBVar01254393

WBVar01254393 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01254393
    Other_name: cewivar00124016
      CE54439:p.Pro234=
      Y46E12BL.1a.1:c.540G>A
      Y46E12BL.1b.1:c.702G>A
      CE39847:p.Pro180=
    HGVSg: CHROMOSOME_II:g.15245146C>T
  Sequence_details: SMap: S_parent: Sequence: Y46E12BL
    Flanking_sequences: GATTCTGTGGAGCACACTGTGTCGGAGCAAACGTTGGCGTAGAAGCCCGG GGGCTCAGGATCCAGTCGTTCCAGCCTGCAATAGTTTTTCAAAAACTTAT
    Mapping_target: Y46E12BL
    Type_of_mutation: Substitution: c T Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (21)
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539090897
    Status: Live
  Affects: Gene: WBGene00021594
    Transcript: Y46E12BL.1a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y46E12BL.1a.1:c.540G>A
        HGVSp: CE39847:p.Pro180=
        cDNA_position: 790
        CDS_position: 540
        Protein_position: 180
        Exon_number: 6/7
        Codon_change: ccG/ccA
        Amino_acid_change: P
      Y46E12BL.1b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y46E12BL.1b.1:c.702G>A
        HGVSp: CE54439:p.Pro234=
        cDNA_position: 702
        CDS_position: 702
        Protein_position: 234
        Exon_number: 5/5
        Codon_change: ccG/ccA
        Amino_acid_change: P
  Reference: WBPaper00037807
  Method: WGS_De_Bono