WormBase Tree Display for Variation: WBVar01254135
expand all nodes | collapse all nodes | view schema
WBVar01254135 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01254135 | |||||
Other_name | cewivar00329007 | ||||||
Y53F4B.45:n.927C>A | |||||||
Y53F4B.15.1:c.732+614G>T | |||||||
HGVSg | CHROMOSOME_II:g.15043085G>T | ||||||
Sequence_details | SMap | S_parent | Sequence | Y53F4B | |||
Flanking_sequences | AAGGACCACTTCCACATCCTACCCCCTCGAAAAGATGCTTTGTCCTCAAA | CGATGATGTTATTTTGCTCTGAGTTACTCACACCTTCTCGAGAGAAAAGA | |||||
Mapping_target | Y53F4B | ||||||
Type_of_mutation | Substitution | g | T | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain (17) | |||||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539090665 | |||
Status | Live | ||||||
Affects | Gene | WBGene00044728 | |||||
WBGene00000208 | |||||||
Transcript | Y53F4B.15.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | Y53F4B.15.1:c.732+614G>T | ||||||
Intron_number | 4/6 | ||||||
Y53F4B.45 | VEP_consequence | non_coding_transcript_exon_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | Y53F4B.45:n.927C>A | ||||||
cDNA_position | 927 | ||||||
Exon_number | 1/1 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |