WormBase Tree Display for Variation: WBVar01243043
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WBVar01243043 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01243043 | |||||
Other_name | cewivar00140002 | ||||||
CE45745:p.Gly240= | |||||||
ZK1067.2a.2:c.27G>A | |||||||
CE43256:p.Gly9= | |||||||
ZK1067.2b.1:c.720G>A | |||||||
ZK1067.2a.1:c.27G>A | |||||||
HGVSg | CHROMOSOME_II:g.9215261G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | ZK1067 | |||
Flanking_sequences | AGACCAATTCGCCAACCGTATTCAATGGTCAGAAACCTCGCCCCCCCAGG | CTCCCGCCGCCTGGAATTTCGATTTCAAACAGTTCGCCTCCTGGATTATC | |||||
Mapping_target | ZK1067 | ||||||
Type_of_mutation | Substitution | g | A | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain (11) | |||||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539080681 | |||
Status | Live | ||||||
Affects | Gene | WBGene00014208 | |||||
Transcript | ZK1067.2a.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | ||||||
HGVSc | ZK1067.2a.1:c.27G>A | ||||||
HGVSp | CE43256:p.Gly9= | ||||||
cDNA_position | 49 | ||||||
CDS_position | 27 | ||||||
Protein_position | 9 | ||||||
Exon_number | 2/18 | ||||||
Codon_change | ggG/ggA | ||||||
Amino_acid_change | G | ||||||
ZK1067.2b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | ||||||
HGVSc | ZK1067.2b.1:c.720G>A | ||||||
HGVSp | CE45745:p.Gly240= | ||||||
cDNA_position | 720 | ||||||
CDS_position | 720 | ||||||
Protein_position | 240 | ||||||
Exon_number | 6/21 | ||||||
Codon_change | ggG/ggA | ||||||
Amino_acid_change | G | ||||||
ZK1067.2a.2 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | ||||||
HGVSc | ZK1067.2a.2:c.27G>A | ||||||
HGVSp | CE43256:p.Gly9= | ||||||
cDNA_position | 764 | ||||||
CDS_position | 27 | ||||||
Protein_position | 9 | ||||||
Exon_number | 7/23 | ||||||
Codon_change | ggG/ggA | ||||||
Amino_acid_change | G | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |