WormBase Tree Display for Variation: WBVar00604017

WBVar00604017 Name: Public_name: tm5745
    Other_name: K10D3.2.1:c.1080_1256+21del
    HGVSg: CHROMOSOME_I:g.7124384_7124713del
  Sequence_details: SMap: S_parent: Sequence: K10D3
    Flanking_sequences: tttctttaaagttgcagaccctcatattta ggtgttgatgcgcagtcacaaagaaccgtc
    Mapping_target: K10D3
    Source_location: 7 CHROMOSOME_I 7124383 7124714 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm5745_external
      tm5745_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 5745
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00006753
    Transcript: K10D3.2.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: K10D3.2.1:c.1080_1256+21del
        cDNA_position: 1189-?
        CDS_position: 1080-?
        Protein_position: 360-?
        Intron_number: 6-7/11
        Exon_number: 6-7/12
  Isolation: Mutagen: TMP/UV
  Genetics: Map: I
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 9635/9636-9965/9966 (330 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele