WormBase Tree Display for Variation: WBVar00602775
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WBVar00602775 | Name | Public_name | WBVar00602775 | |||
---|---|---|---|---|---|---|
Other_name | oicr_ce1194 | |||||
cewivar00497560 | ||||||
CE37847:p.Phe24Ser | ||||||
T04B2.8.1:c.71T>C | ||||||
HGVSg | CHROMOSOME_IV:g.10050993A>G | |||||
Sequence_details | SMap | S_parent | Sequence | T04B2 | ||
Flanking_sequences | CATCCATATGGATCCTGGCATTCAGCTGGAGAAGCGGTGTCACAAACACCACAATTAAACACTAAATATCCCAAA | ATCCACACAAAAAGACGAGGTTAACTGAAAAAAATTAAATAATTTTCTAAGCAAAGGTATACAAGATAAAACTTA | ||||
Mapping_target | T04B2 | |||||
Type_of_mutation | Substitution | a | g | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027649 | From_analysis | WGS_Stein | ||||
Analysis | WGS_Stein | |||||
Million_mutation_project_reanalysis | ||||||
DB_info | Database | dbSNP_ss | ss | ss477719703 | ||
Status | Live | |||||
Affects | Gene | WBGene00044018 | ||||
Transcript | T04B2.8.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
HGVSc | T04B2.8.1:c.71T>C | |||||
HGVSp | CE37847:p.Phe24Ser | |||||
cDNA_position | 144 | |||||
CDS_position | 71 | |||||
Protein_position | 24 | |||||
Exon_number | 3/7 | |||||
Codon_change | tTt/tCt | |||||
Amino_acid_change | F/S | |||||
Remark | validatation rate is over 97% | |||||
Method | WGS_Stein |