WormBase Tree Display for Variation: WBVar00600929

WBVar00600929 Name: Public_name: tm5564
    Other_name: F59F4.2.1:c.158-66_*149del
    HGVSg: CHROMOSOME_X:g.15842017_15842272del
  Sequence_details: SMap: S_parent: Sequence: F59F4
    Flanking_sequences: tcgcctagcttatcgatagattttaagcat gataatgtgataatactcgctagtgcgatc
    Mapping_target: F59F4
    Source_location: 7 CHROMOSOME_X 15842016 15842273 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm5564_external
      tm5564_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 5564
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00010337
    Transcript: F59F4.2.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F59F4.2.1:c.158-66_*149del
        cDNA_position: ?-375
        Intron_number: 2/3
        Exon_number: 3-4/4
  Isolation: Mutagen: TMP/UV
  Genetics: Map: X
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 11335/11336-11591/11592 (256 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele