WormBase Tree Display for Variation: WBVar00592425
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| WBVar00592425 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00592425 | |||
| Other_name | haw172560 | ||||
| cewivar00247998 | |||||
| F35E8.8.1:c.75C>A | |||||
| CE15958:p.Ala25= | |||||
| HGVSg | CHROMOSOME_V:g.15915862G>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F35E8 | |
| Flanking_sequences | AACTTCTCCCACTCCTCATCGGTAAGTCTGTTATCTTCATATTTCTGCTC | GCGGCAGCAAAGATTTGACGGCAGAGCTCTCCGGCTCCGCGTCCATCGAA | |||
| Mapping_target | F35E8 | ||||
| Type_of_mutation | Substitution | g | t | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Yanai | |||||
| WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Person | WBPerson4037 | ||||
| Analysis | WGS_Yanai | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00001786 | |||
| Transcript | F35E8.8.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F35E8.8.1:c.75C>A | ||||
| HGVSp | CE15958:p.Ala25= | ||||
| cDNA_position | 209 | ||||
| CDS_position | 75 | ||||
| Protein_position | 25 | ||||
| Exon_number | 2/4 | ||||
| Codon_change | gcC/gcA | ||||
| Amino_acid_change | A | ||||
| Reference | WBPaper00038208 | ||||
| Method | WGS_Yanai |
