WormBase Tree Display for Variation: WBVar00586837
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| WBVar00586837 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00586837 | |||
| Other_name | haw166972 | ||||
| cewivar00235266 | |||||
| W01A11.3a.1:c.498+836T>C | |||||
| W01A11.3b.2:c.300+836T>C | |||||
| W01A11.3b.1:c.300+836T>C | |||||
| HGVSg | CHROMOSOME_V:g.6473831T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | W01A11 | |
| Flanking_sequences | CTCGACCTTCATCTGCCTCGTTATACTATACCTCCAAACAACAATTAACA | TTTTCTTCCCTCACTTTTCATCCTTCCTGTTCCTCAACAAAACCTCACGC | |||
| Mapping_target | W01A11 | ||||
| Type_of_mutation | Substitution | t | c | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Yanai | |||||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Person | WBPerson4037 | ||||
| Analysis | WGS_Yanai | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006815 | |||
| Transcript | W01A11.3a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | W01A11.3a.1:c.498+836T>C | ||||
| Intron_number | 6/17 | ||||
| W01A11.3b.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W01A11.3b.2:c.300+836T>C | ||||
| Intron_number | 5/16 | ||||
| W01A11.3b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W01A11.3b.1:c.300+836T>C | ||||
| Intron_number | 4/15 | ||||
| Reference | WBPaper00038208 | ||||
| Method | WGS_Yanai |
