WormBase Tree Display for Variation: WBVar00584125

WBVar00584125 Evidence: Paper_evidence: WBPaper00038208
  Name: Public_name: WBVar00584125
    Other_name: haw164260
      cewivar00229536
      T27C4.4b.2:c.2608-906C>T
      T27C4.4d.1:c.*884+439C>T
      T27C4.4a.1:c.2918+439C>T
      T27C4.4b.1:c.2608-906C>T
      T27C4.4e.1:c.2203-906C>T
    HGVSg: CHROMOSOME_V:g.3711447C>T
  Sequence_details: SMap: S_parent: Sequence: T27C4
    Flanking_sequences: CACTACTTCTTCCTTCCTCTCTCTTGTGCATGGGCTTCACCGCGATTTAG TTAGTAAACGGCACCTTTTTCGGTAGTTTTTTTCAGTTAATCATTAAAAA
    Mapping_target: T27C4
    Type_of_mutation: Substitution: c t
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
          WGS_Yanai
    Person: WBPerson4037
    Analysis: WGS_Yanai
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00003025
    Transcript: T27C4.4d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T27C4.4d.1:c.*884+439C>T
        Intron_number: 8/8
      T27C4.4b.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T27C4.4b.2:c.2608-906C>T
        Intron_number: 7/8
      T27C4.4a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T27C4.4a.1:c.2918+439C>T
        Intron_number: 8/9
      T27C4.4e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T27C4.4e.1:c.2203-906C>T
        Intron_number: 4/4
      T27C4.4b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T27C4.4b.1:c.2608-906C>T
        Intron_number: 7/8
  Reference: WBPaper00038208
  Method: WGS_Yanai