WormBase Tree Display for Variation: WBVar00584124
expand all nodes | collapse all nodes | view schema
WBVar00584124 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00584124 | |||
Other_name | haw164259 | ||||
cewivar00229534 | |||||
T27C4.4d.1:c.*367C>G | |||||
T27C4.4a.1:c.2608-207C>G | |||||
T27C4.4b.1:c.2607+373C>G | |||||
T27C4.4e.1:c.2202+373C>G | |||||
T27C4.4b.2:c.2607+373C>G | |||||
HGVSg | CHROMOSOME_V:g.3710491C>G | ||||
Sequence_details | SMap | S_parent | Sequence | T27C4 | |
Flanking_sequences | TTGTAGATCAACGTAGATCAAGCCTAAATCAGACACCCTGAAACACACAC | ACGAGTGAAAAATGAACAATGTGTGCGATTTTCCGAATCCTAACCGCCCG | |||
Mapping_target | T27C4 | ||||
Type_of_mutation | Substitution | c | g | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Yanai | |||||
Person | WBPerson4037 | ||||
Analysis | WGS_Yanai | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00003025 | |||
Transcript | T27C4.4d.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T27C4.4d.1:c.*367C>G | ||||
cDNA_position | 3004 | ||||
Exon_number | 8/9 | ||||
T27C4.4b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T27C4.4b.2:c.2607+373C>G | ||||
Intron_number | 7/8 | ||||
T27C4.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T27C4.4a.1:c.2608-207C>G | ||||
Intron_number | 7/9 | ||||
T27C4.4e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T27C4.4e.1:c.2202+373C>G | ||||
Intron_number | 4/4 | ||||
T27C4.4b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T27C4.4b.1:c.2607+373C>G | ||||
Intron_number | 7/8 | ||||
Reference | WBPaper00038208 | ||||
Method | WGS_Yanai |