WormBase Tree Display for Variation: WBVar00584115
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| WBVar00584115 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00584115 | |||
| Other_name (11) | |||||
| HGVSg | CHROMOSOME_V:g.3706945A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | T27C4 | |
| Flanking_sequences | CCGTGTGAGAATTGCGGGACGCTGGACGCTCTCAACTGGTATCAGTGGGG | GGTGTCGGCGATAAGAAGGTTCTGTGCTCGACGTGTTGGATTCAGTGGAA | |||
| Mapping_target | T27C4 | ||||
| Type_of_mutation | Substitution | a | t | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Yanai | |||||
| Person | WBPerson4037 | ||||
| Analysis | WGS_Yanai | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00003025 | |||
| Transcript | T27C4.4d.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | T27C4.4d.1:c.1806A>T | ||||
| HGVSp | CE33331:p.Gly602= | ||||
| cDNA_position | 1830 | ||||
| CDS_position | 1806 | ||||
| Protein_position | 602 | ||||
| Exon_number | 4/9 | ||||
| Codon_change | ggA/ggT | ||||
| Amino_acid_change | G | ||||
| T27C4.4b.2 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | T27C4.4b.2:c.1806A>T | ||||
| HGVSp | CE21212:p.Gly602= | ||||
| cDNA_position | 1830 | ||||
| CDS_position | 1806 | ||||
| Protein_position | 602 | ||||
| Exon_number | 4/9 | ||||
| Codon_change | ggA/ggT | ||||
| Amino_acid_change | G | ||||
| T27C4.4a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | T27C4.4a.1:c.1806A>T | ||||
| HGVSp | CE21211:p.Gly602= | ||||
| cDNA_position | 1823 | ||||
| CDS_position | 1806 | ||||
| Protein_position | 602 | ||||
| Exon_number | 4/10 | ||||
| Codon_change | ggA/ggT | ||||
| Amino_acid_change | G | ||||
| T27C4.4e.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | T27C4.4e.1:c.1401A>T | ||||
| HGVSp | CE51633:p.Gly467= | ||||
| cDNA_position | 1401 | ||||
| CDS_position | 1401 | ||||
| Protein_position | 467 | ||||
| Exon_number | 1/5 | ||||
| Codon_change | ggA/ggT | ||||
| Amino_acid_change | G | ||||
| T27C4.4b.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | T27C4.4b.1:c.1806A>T | ||||
| HGVSp | CE21212:p.Gly602= | ||||
| cDNA_position | 1823 | ||||
| CDS_position | 1806 | ||||
| Protein_position | 602 | ||||
| Exon_number | 4/9 | ||||
| Codon_change | ggA/ggT | ||||
| Amino_acid_change | G | ||||
| Reference | WBPaper00038208 | ||||
| Method | WGS_Yanai |
