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WormBase Tree Display for Variation: WBVar00570506

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Name Class

WBVar00570506EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00570506
Other_namehaw150641
cewivar00203383
Y54G2A.11b.3:c.119-104G>A
Y54G2A.11a.1:c.1343-104G>A
Y54G2A.11b.2:c.119-104G>A
Y54G2A.11b.1:c.119-104G>A
HGVSgCHROMOSOME_IV:g.2766188C>T
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesATTGGAATTTGGCTCACCGAGAGCTTCAATTTAAGTACAATCATGACCTATTTGTTCAAAGTCGGAAAACTTGGGTCCCGCCGCGAAAATTTCCGGGTTA
Mapping_targetY54G2A
Type_of_mutationSubstitutionct
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (11)
PersonWBPerson4037
AnalysisWGS_Yanai
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021876
TranscriptY54G2A.11b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.11b.3:c.119-104G>A
Intron_number4/5
Y54G2A.11b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.11b.1:c.119-104G>A
Intron_number5/6
Y54G2A.11a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.11a.1:c.1343-104G>A
Intron_number6/7
Y54G2A.11b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.11b.2:c.119-104G>A
Intron_number5/6
ReferenceWBPaper00038208
MethodWGS_Yanai