WormBase Tree Display for Variation: WBVar00538485
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WBVar00538485 | Name | Public_name | WBVar00538485 | ||
---|---|---|---|---|---|
Other_name | haw118620 | ||||
LSJ2_26 | |||||
oicr_ce108 | |||||
cewivar00001022 | |||||
C36F7.4a.1:c.-42+141A>G | |||||
C36F7.4a.2:c.-134+141A>G | |||||
C36F7.4e.1:c.229+141A>G | |||||
C36F7.4c.1:c.229+141A>G | |||||
C36F7.4g.1:c.229+141A>G | |||||
C36F7.4b.1:c.229+141A>G | |||||
HGVSg | CHROMOSOME_I:g.9574008T>C | ||||
Sequence_details | SMap | S_parent | Sequence | C36F7 | |
Flanking_sequences | GAAAAACTTTTTGGGAATTCAGTGAGTCTCTTGGATTCTTAGAGCTGCCT | TCTTCGTTACAGCTCATTGTTAACTAATAATATCCCCTCCGCGCGAGAGT | |||
Mapping_target | C36F7 | ||||
Type_of_mutation | Substitution | t | c | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (208) | |||||
Laboratory | QX | ||||
CX | |||||
Person | WBPerson4037 | ||||
WBPerson1730 | |||||
Analysis | WGS_Yanai | ||||
WGS_McGrath | |||||
WGS_Stein | |||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01432570 | |||
WBVar00601689 | |||||
WBVar00601307 | |||||
Status | Live | ||||
Affects | Gene | WBGene00004372 | |||
Transcript | C36F7.4a.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C36F7.4a.2:c.-134+141A>G | ||||
Intron_number | 1/11 | ||||
C36F7.4g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C36F7.4g.1:c.229+141A>G | ||||
Intron_number | 1/10 | ||||
C36F7.4e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C36F7.4e.1:c.229+141A>G | ||||
Intron_number | 1/11 | ||||
C36F7.4c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C36F7.4c.1:c.229+141A>G | ||||
Intron_number | 1/10 | ||||
C36F7.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C36F7.4a.1:c.-42+141A>G | ||||
Intron_number | 1/10 | ||||
C36F7.4b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C36F7.4b.1:c.229+141A>G | ||||
Intron_number | 1/10 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00040097 | |||||
WBPaper00040707 | |||||
Method | WGS_Yanai |